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structure-visualization

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moyulyy / fixatom

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🔬 FixAtoms Studio — 本地离线原子结构固定工具。基于 PySide6 (Qt 6) + ASE + 3Dmol.js，支持 CIF / POSCAR / XSD 读取，可视化固定原子并导出 VASP Selective dynamics POSCAR；内置 118 元素周期表、六个晶胞标准视图、正交/透视投影与深度雾化。

python vasp density-functional-theory crystallography computational-chemistry cif poscar materials-science ase 3dmol qt6 pyside6 structure-visualization selective-dynamics
  • Updated Sep 21, 2026
  • Python

GiatrasKon / Algorithms-in-Structural-Bioinformatics-Assignments

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Assignments from the 'Algorithms in Structural Bioinformatics' graduate course, exploring RNA folding, molecular conformational analysis, and protein structure comparison using Python and bioinformatics tools.

python bioinformatics structural-biology jupyter-notebook computational-biology biopython pymol conformational-analysis structural-bioinformatics rna-folding rmsd root-mean-square-deviation protein-structure-analysis sars-cov-2 chimerax alphafold2 serotonin structure-visualization crude-energy-minimization secondary-structure-elements
  • Updated Dec 3, 2024
  • Jupyter Notebook

bytz0 / go-diagram

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Go Diagram - UML Visualization Tool for Go Projects

code-navigation web-application code-review software-engineering software-development uml-diagram development-environment visual-programming programming-tools code-structure team-collaboration code-organization educational-tool code-mapping architecture-planning go-development structure-visualization interactive-diagram struct-visualization package-visualization
  • Updated Nov 8, 2024
  • JavaScript

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