Extraction of 3D skeletons from meshes.
Skeletonization of 3D Point Clouds
Implementation of Basic Digital Image Processing Tasks in Python / OpenCV
Straight skeleton implementation in Python
Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
Neural Medial Axis Approximation of Point Clouds for 3D Tree Skeletonization
This repository implements skeleton matching algorithm.
Mesh Skeleton Extraction Using Laplacian Contraction
In this repository you can see the code for skeletonization of binary images using our novel fuzzy inference system.
Cylindrical Shape Decomposition
Software to analyse the topology of vascular networks.
A set of tools for manipulation of the .nml, .swc, .zip, and .hoc files generated from webKnossos and related software. Used for processing of segmentation and skeletonization data.
Repository for the Hands Free Project of MMTLab
Persistence-inspired concepts for skeleton analysis
Official code related to the paper From point clouds to plant traits: investigation of a pipeline for phenotyping of tomato plants using skeletonisation
A tool for automatic measurements of axon lengths, the nerve fibers connecting neurons in a brain.
Tools and wrappers for skeletonization.
A collection of scripts to automate the steps for the quantification of vascular-like structures in 3D using Amira, Fiji/ImageJ and WinFiber3D.
Macromolecular phasing can be succesfully initiated from severely innacurate phases: binary centric and acentric sets and universal, constant figure of merit.
Digital Image Processing
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