An open, platform-independent software toolkit for storage and interpretation of sequence data, implemented in Java.
Universal STR Allele Toolkit (USAT) for viewing and comparison
Big Data tool for scalable short-read error correction
Simple Java profiling tool
Parallel tool to perform quality control operations on genomic datasets
Spark-based DNA error correction on distributed-memory systems
Multi-service bioinformatics platform for DNA/RNA sequence analysis — Spring Boot · FastAPI · PostgreSQL · AI classification · async pipeline
MCP server for accessing InterPro data
Sequence-based (STIDE) anomaly detection for irregular application logs — learn a known-good log, then highlight what breaks the pattern. Pure JDK, no dependencies. Original work of Vladyslav Gusyev.
Sequence management tools relying on the Bioinformatics Databank Manager System, BeeDeeM (miror).
Sequence Analysis Pipeline for the IRIDA Platform for Viral Genomes
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