Systematically learn and evaluate the latent geometry of high-dimensional data, with a focus on scRNAseq analysis
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Updated
Oct 2, 2026 - Python
Systematically learn and evaluate the latent geometry of high-dimensional data, with a focus on scRNAseq analysis
Deprecated in favour of TopoMetry: https://github.com/davisidarta/topometry
Gephi ForceAtlas2 with networkx compatibility and support for thread-based parallelism
Easy force-directed graph layout with python
Diagrams and charts your agent can draw and check. Mermaid, a JSON spec, or a CSV in; an audited SVG out. CLI and MCP server.
Fast large graph layout via community partitioning
ComfyUI 工作流命令行工具箱:读/改/校验/DSL 拼装/自动排版/离线渲染。零依赖 Python,自动排版保证 0 节点重叠。CLI toolkit for reading, editing, composing and auto-layouting ComfyUI workflows.
Early-stage exploration of bipartite graph layout via NSGA-II multi-objective optimization (Python + C++ prototype) — precursor to bipartite-layout
Service to use networkx algorithms to get optimal layout for node positions in a graph
Graph drawing and charts in a terminal: DOT, .kg and JSON in; pixels, box drawing or SVG out.
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